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b4galt7 xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) [ Electrophorus electricus (electric eel) ]

Gene ID: 113573384, updated on 18-Jun-2024

Summary

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Gene symbol
b4galt7
Gene description
xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)
See related
Ensembl:ENSEEEG00000014644
Gene type
protein coding
RefSeq status
MODEL
Organism
Electrophorus electricus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Gymnotiformes; Gymnotoidei; Gymnotidae; Electrophorus
Orthologs
human zebrafish all
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Genomic context

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See b4galt7 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
6
Annotation release Status Assembly Chr Location
101 current fEleEle1.pri (GCF_013358815.1) 12 NC_049546.1 (6279832..6284227)
100 previous assembly Ee_SOAP_WITH_SSPACE (GCF_003665695.1) Unplaced Scaffold NW_020826010.1 (1062385..1066422, complement)

Chromosome 12 - NC_049546.1Genomic Context describing neighboring genes Neighboring gene lectin, mannose-binding 2 Neighboring gene transmembrane p24 trafficking protein 9 Neighboring gene empty spiracles homeobox 3 Neighboring gene coiled-coil domain containing 69

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables xylosylprotein 4-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Electrophorus electricus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEleEle1.pri

Genomic

  1. NC_049546.1 Reference fEleEle1.pri

    Range
    6279832..6284227
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027003601.2 → XP_026859402.1  beta-1,4-galactosyltransferase 7

    UniProtKB/TrEMBL
    A0A4W4G375
    Related
    ENSEEEP00000030571.1, ENSEEET00000030932.2
    Conserved Domains (1) summary
    cd00899
    Location:82 → 290
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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