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LOC113563416 heparan sulfate glucosamine 3-O-sulfotransferase 6-like [ Ooceraea biroi (clonal raider ant) ]

Gene ID: 113563416, updated on 21-Dec-2023

Summary

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Gene symbol
LOC113563416
Gene description
heparan sulfate glucosamine 3-O-sulfotransferase 6-like
Locus tag
DMN91_012746
See related
EnsemblRapid:LOC113563416
Gene type
protein coding
RefSeq status
MODEL
Organism
Ooceraea biroi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Dorylinae; Ooceraea
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Genomic context

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See LOC113563416 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Obir_v5.4 (GCF_003672135.1) 14 NC_039519.1 (406910..408194)

Chromosome 14 - NC_039519.1Genomic Context describing neighboring genes Neighboring gene FGGY carbohydrate kinase domain-containing protein Neighboring gene heparan sulfate glucosamine 3-O-sulfotransferase 3B1 Neighboring gene uncharacterized LOC113563369 Neighboring gene G-protein coupled receptor 143-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039519.1 Chromosome 14 Reference Obir_v5.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ooceraea biroi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Obir_v5.4

Genomic

  1. NC_039519.1 Reference Obir_v5.4

    Range
    406910..408194
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026975062.1 → XP_026830863.1  heparan sulfate glucosamine 3-O-sulfotransferase 6-like

    Related
    XP_026830863.1, XM_026975062.1
    Conserved Domains (2) summary
    cl02565
    Location:139 → 176
    RGS; Regulator of G protein signaling (RGS) domain superfamily
    cl21551
    Location:30 → 131
    Sulfotransfer_3; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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