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zgc:101663 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C [ Pangasianodon hypophthalmus (striped catfish) ]

Gene ID: 113545614, updated on 15-Mar-2024

Summary

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Gene symbol
zgc:101663
Gene description
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C
Locus tag
PHYPO_G00067810
See related
EnsemblRapid:ENSPHYG00025010276
Gene type
protein coding
RefSeq status
MODEL
Organism
Pangasianodon hypophthalmus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Pangasiidae; Pangasianodon
Orthologs
zebrafish all
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Genomic context

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See zgc:101663 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_02 current fPanHyp1.pri (GCF_027358585.1) 16 NC_069725.1 (4046992..4059741, complement)

Chromosome 16 - NC_069725.1Genomic Context describing neighboring genes Neighboring gene tetraspanin 2b Neighboring gene solute carrier family 25 member 55b Neighboring gene adaptor related protein complex 4 subunit beta 1 Neighboring gene bridge-like lipid transfer protein family member 3A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069725.1 Chromosome 16 Reference fPanHyp1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027358585.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPanHyp1.pri

Genomic

  1. NC_069725.1 Reference fPanHyp1.pri

    Range
    4046992..4059741 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026945028.3 → XP_026800829.3  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C

    Related
    ENSPHYP00025022726.1, ENSPHYT00025024791.1

  2. XM_026945027.3 → XP_026800828.3  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C

  3. XM_034311988.2 → XP_034167879.2  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C

Nucleotide Protein
Heading Accession and Version

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