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gal3st1b galactose-3-O-sulfotransferase 1b [ Pangasianodon hypophthalmus (striped catfish) ]

Gene ID: 113544750, updated on 15-Mar-2024

Summary

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Gene symbol
gal3st1b
Gene description
galactose-3-O-sulfotransferase 1b
Locus tag
PHYPO_G00077800
See related
EnsemblRapid:ENSPHYG00025017572
Gene type
protein coding
RefSeq status
MODEL
Organism
Pangasianodon hypophthalmus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Pangasiidae; Pangasianodon
Orthologs
zebrafish all
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Genomic context

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See gal3st1b in Genome Data Viewer
Location:
chromosome: 17
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_02 current fPanHyp1.pri (GCF_027358585.1) 17 NC_069726.1 (5181772..5203551)

Chromosome 17 - NC_069726.1Genomic Context describing neighboring genes Neighboring gene TP53 regulated inhibitor of apoptosis 1 Neighboring gene serine and arginine rich splicing factor 9 Neighboring gene erythrocyte membrane protein band 4.1 like 4A Neighboring gene APC regulator of WNT signaling pathway

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069726.1 Chromosome 17 Reference fPanHyp1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylceramide sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in galactosylceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in myelination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactosylceramide sulfotransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027358585.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPanHyp1.pri

Genomic

  1. NC_069726.1 Reference fPanHyp1.pri

    Range
    5181772..5203551
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053241193.1 → XP_053097168.1  galactosylceramide sulfotransferase

  2. XM_026943686.3 → XP_026799487.3  galactosylceramide sulfotransferase

    Related
    ENSPHYP00025042051.1, ENSPHYT00025045020.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases