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cog5 component of oligomeric golgi complex 5 [ Pangasianodon hypophthalmus (striped catfish) ]

Gene ID: 113544513, updated on 15-Mar-2024

Summary

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Gene symbol
cog5
Gene description
component of oligomeric golgi complex 5
Locus tag
PHYPO_G00090550
See related
EnsemblRapid:ENSPHYG00025008747
Gene type
protein coding
RefSeq status
MODEL
Organism
Pangasianodon hypophthalmus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Pangasiidae; Pangasianodon
Orthologs
human zebrafish all
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Genomic context

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See cog5 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2023_02 current fPanHyp1.pri (GCF_027358585.1) 18 NC_069727.1 (19731649..19753215, complement)

Chromosome 18 - NC_069727.1Genomic Context describing neighboring genes Neighboring gene integrator complex subunit 13 Neighboring gene pseudouridine synthase 7 like Neighboring gene dihydrouridine synthase 4-like (S. cerevisiae) Neighboring gene B cell receptor associated protein 29

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069727.1 Chromosome 18 Reference fPanHyp1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved oligomeric Golgi complex subunit 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027358585.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPanHyp1.pri

Genomic

  1. NC_069727.1 Reference fPanHyp1.pri

    Range
    19731649..19753215 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034313049.2 → XP_034168940.2  conserved oligomeric Golgi complex subunit 5 isoform X1

    Related
    ENSPHYP00025019774.1, ENSPHYT00025021449.1

  2. XM_053241627.1 → XP_053097602.1  conserved oligomeric Golgi complex subunit 5 isoform X2

    Related
    ENSPHYP00025019848.1, ENSPHYT00025021523.1
Nucleotide Protein
Heading Accession and Version

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