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dnajb6a DnaJ heat shock protein family (Hsp40) member B6a [ Pangasianodon hypophthalmus (striped catfish) ]

Gene ID: 113543150, updated on 15-Mar-2024

Summary

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Gene symbol
dnajb6a
Gene description
DnaJ heat shock protein family (Hsp40) member B6a
Locus tag
PHYPO_G00117500
See related
EnsemblRapid:ENSPHYG00025008162
Gene type
protein coding
RefSeq status
MODEL
Organism
Pangasianodon hypophthalmus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Pangasiidae; Pangasianodon
Orthologs
zebrafish all
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Genomic context

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See dnajb6a in Genome Data Viewer
Location:
chromosome: 21
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_02 current fPanHyp1.pri (GCF_027358585.1) 21 NC_069730.1 (1004593..1017456, complement)

Chromosome 21 - NC_069730.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 70 Neighboring gene potassium voltage-gated channel subfamily B member 2a Neighboring gene transient receptor potential cation channel, subfamily A, member 1a Neighboring gene sonic hedgehog signaling molecule b Neighboring gene RNA binding motif protein 33b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069730.1 Chromosome 21 Reference fPanHyp1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily B member 6a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027358585.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPanHyp1.pri

Genomic

  1. NC_069730.1 Reference fPanHyp1.pri

    Range
    1004593..1017456 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034314785.2 → XP_034170676.2  dnaJ homolog subfamily B member 6a isoform X1

    Related
    ENSPHYP00025018341.1, ENSPHYT00025019797.1

  2. XM_034314786.2 → XP_034170677.2  dnaJ homolog subfamily B member 6a isoform X2

  3. XM_053227589.1 → XP_053083564.1  dnaJ homolog subfamily B member 6a isoform X3

    Related
    ENSPHYP00025018337.1, ENSPHYT00025019790.1
Nucleotide Protein
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