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LOC113535329 tight junction protein ZO-2 [ Pangasianodon hypophthalmus (striped catfish) ]

Gene ID: 113535329, updated on 15-Mar-2024

Summary

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Gene symbol
LOC113535329
Gene description
tight junction protein ZO-2
Locus tag
PHYPO_G00230600
See related
EnsemblRapid:ENSPHYG00025014340
Gene type
protein coding
RefSeq status
MODEL
Organism
Pangasianodon hypophthalmus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Pangasiidae; Pangasianodon
Also known as
tjp2
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Genomic context

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See LOC113535329 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
25
Annotation release Status Assembly Chr Location
RS_2023_02 current fPanHyp1.pri (GCF_027358585.1) 8 NC_069717.1 (6956871..7011437, complement)

Chromosome 8 - NC_069717.1Genomic Context describing neighboring genes Neighboring gene formin binding protein 1a Neighboring gene piercer of microtubule wall 1 Neighboring gene phosphatidylinositol-4-phosphate 5-kinase, type I, beta b Neighboring gene frataxin

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069717.1 Chromosome 8 Reference fPanHyp1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of endothelial intestinal barrier IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of blood-brain barrier permeability IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tight junction protein ZO-2
Names
tight junction protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027358585.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPanHyp1.pri

Genomic

  1. NC_069717.1 Reference fPanHyp1.pri

    Range
    6956871..7011437 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034306344.2 → XP_034162235.2  tight junction protein ZO-2 isoform X2

  2. XM_026928576.3 → XP_026784377.2  tight junction protein ZO-2 isoform X1

    Related
    ENSPHYP00025035028.1, ENSPHYT00025037264.1

  3. XM_026928577.3 → XP_026784378.2  tight junction protein ZO-2 isoform X3

    Related
    ENSPHYP00025035003.1, ENSPHYT00025037239.1

RNA

  1. XR_008302154.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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