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rxylt1 ribitol xylosyltransferase 1 [ Pangasianodon hypophthalmus (striped catfish) ]

Gene ID: 113534283, updated on 15-Mar-2024

Summary

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Gene symbol
rxylt1
Gene description
ribitol xylosyltransferase 1
Locus tag
PHYPO_G00212840
See related
EnsemblRapid:ENSPHYG00025018975
Gene type
protein coding
RefSeq status
MODEL
Organism
Pangasianodon hypophthalmus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Pangasiidae; Pangasianodon
Orthologs
human zebrafish all
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Genomic context

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See rxylt1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_02 current fPanHyp1.pri (GCF_027358585.1) 6 NC_069715.1 (9294903..9301886)

Chromosome 6 - NC_069715.1Genomic Context describing neighboring genes Neighboring gene protein C19orf12 homolog Neighboring gene cytochrome b-c1 complex subunit Rieske, mitochondrial Neighboring gene SLIT-ROBO Rho GTPase activating protein 1a Neighboring gene protein mono-ADP-ribosyltransferase PARP12

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069715.1 Chromosome 6 Reference fPanHyp1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ribitol beta-1,4-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribitol-5-phosphate xylosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027358585.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPanHyp1.pri

Genomic

  1. NC_069715.1 Reference fPanHyp1.pri

    Range
    9294903..9301886
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026926966.3 → XP_026782767.1  ribitol-5-phosphate xylosyltransferase 1

    UniProtKB/TrEMBL
    A0A5N5P671
    Related
    ENSPHYP00025045527.1, ENSPHYT00025048691.1
Nucleotide Protein
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