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LOC113530023 torsin-1A-interacting protein 2 [ Pangasianodon hypophthalmus (striped catfish) ]

Gene ID: 113530023, updated on 6-Jun-2024

Summary

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Gene symbol
LOC113530023
Gene description
torsin-1A-interacting protein 2
Locus tag
PHYPO_G00232060
See related
EnsemblRapid:ENSPHYG00025027292
Gene type
protein coding
RefSeq status
MODEL
Organism
Pangasianodon hypophthalmus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Pangasiidae; Pangasianodon
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Genomic context

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See LOC113530023 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_02 current fPanHyp1.pri (GCF_027358585.1) 8 NC_069717.1 (11353332..11359334, complement)

Chromosome 8 - NC_069717.1Genomic Context describing neighboring genes Neighboring gene DEP domain containing 1a Neighboring gene putative ferric-chelate reductase 1 Neighboring gene uncharacterized LOC113530036 Neighboring gene aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069717.1 Chromosome 8 Reference fPanHyp1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027358585.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPanHyp1.pri

Genomic

  1. NC_069717.1 Reference fPanHyp1.pri

    Range
    11353332..11359334 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034306672.2 → XP_034162563.2  torsin-1A-interacting protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A5N5NM78

  2. XM_026919704.3 → XP_026775505.3  torsin-1A-interacting protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A5N5NM78
    Related
    ENSPHYP00025058333.1, ENSPHYT00025066407.1

  3. XM_026919695.3 → XP_026775496.3  torsin-1A-interacting protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A5N5NM78
    Related
    ENSPHYP00025058337.1, ENSPHYT00025066414.1
Nucleotide Protein
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