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si:ch211-216b21.2 heparan sulfate glucosamine 3-O-sulfotransferase 3A1 [ Pangasianodon hypophthalmus (striped catfish) ]

Gene ID: 113527175, updated on 23-Nov-2023

Summary

Gene symbol
si:ch211-216b21.2
Gene description
heparan sulfate glucosamine 3-O-sulfotransferase 3A1
Locus tag
PHYPO_G00038340
See related
EnsemblRapid:ENSPHYG00025012581
Gene type
protein coding
RefSeq status
MODEL
Organism
Pangasianodon hypophthalmus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Pangasiidae; Pangasianodon
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Genomic context

See si:ch211-216b21.2 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_02 current fPanHyp1.pri (GCF_027358585.1) 12 NC_069721.1 (21387021..21429070)

Chromosome 12 - NC_069721.1Genomic Context describing neighboring genes Neighboring gene heparan sulfate glucosamine 3-O-sulfotransferase 3B1-like Neighboring gene cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene F-box and WD repeat domain containing 10

Genomic regions, transcripts, and products

Genomic Sequence:
NC_069721.1 Chromosome 12 Reference fPanHyp1.pri

General protein information

Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 3A1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027358585.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPanHyp1.pri

Genomic

  1. NC_069721.1 Reference fPanHyp1.pri

    Range
    21387021..21429070
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026914739.3XP_026770540.2  heparan sulfate glucosamine 3-O-sulfotransferase 3A1

    UniProtKB/TrEMBL
    A0A5N5MLG9
    Related
    ENSPHYP00025029280.1, ENSPHYT00025031435.1
    Conserved Domains (1) summary
    pfam00685
    Location:120361
    Sulfotransfer_1; Sulfotransferase domain