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si:dkey-150i13.2 mitochondrial carnitine/acylcarnitine carrier protein [ Pangasianodon hypophthalmus (striped catfish) ]

Gene ID: 113525329, updated on 15-Mar-2024

Summary

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Gene symbol
si:dkey-150i13.2
Gene description
mitochondrial carnitine/acylcarnitine carrier protein
Locus tag
PHYPO_G00066790
See related
EnsemblRapid:ENSPHYG00025011579
Gene type
protein coding
RefSeq status
MODEL
Organism
Pangasianodon hypophthalmus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Pangasiidae; Pangasianodon
Orthologs
zebrafish all
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Genomic context

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See si:dkey-150i13.2 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_02 current fPanHyp1.pri (GCF_027358585.1) 16 NC_069725.1 (375018..382993)

Chromosome 16 - NC_069725.1Genomic Context describing neighboring genes Neighboring gene DNA-binding protein inhibitor ID-1 Neighboring gene histocompatibility (minor) 13 Neighboring gene rab GDP dissociation inhibitor alpha Neighboring gene protein kinase C and casein kinase substrate in neurons protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069725.1 Chromosome 16 Reference fPanHyp1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027358585.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPanHyp1.pri

Genomic

  1. NC_069725.1 Reference fPanHyp1.pri

    Range
    375018..382993
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034311939.2 → XP_034167830.1  mitochondrial carnitine/acylcarnitine carrier protein

    UniProtKB/TrEMBL
    A0A5N5LTQ2
    Related
    ENSPHYP00025026660.1, ENSPHYT00025028729.1
    Conserved Domains (1) summary
    pfam00153
    Location:109 → 200
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

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