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LOC113523898 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9-like [ Pangasianodon hypophthalmus (striped catfish) ]

Gene ID: 113523898, updated on 23-Nov-2023

Summary

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Gene symbol
LOC113523898
Gene description
4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9-like
See related
EnsemblRapid:ENSPHYG00025004626
Gene type
protein coding
RefSeq status
MODEL
Organism
Pangasianodon hypophthalmus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Pangasiidae; Pangasianodon
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Genomic context

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See LOC113523898 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_02 current fPanHyp1.pri (GCF_027358585.1) 9 NC_069718.1 (1849320..1853555, complement)

Chromosome 9 - NC_069718.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113523877 Neighboring gene oxysterol-binding protein-related protein 10 Neighboring gene transcription termination factor 1b, mitochondrial Neighboring gene dihydrouridine synthase 3-like (S. cerevisiae)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069718.1 Chromosome 9 Reference fPanHyp1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027358585.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPanHyp1.pri

Genomic

  1. NC_069718.1 Reference fPanHyp1.pri

    Range
    1849320..1853555 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026909959.3 → XP_026765760.3  4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9-like

    Related
    ENSPHYP00025009272.1, ENSPHYT00025010491.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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