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ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [ Athene cunicularia (burrowing owl) ]

Gene ID: 113491567, updated on 3-Aug-2024

Summary

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Gene symbol
ST3GAL6
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 6
See related
Ensembl:ENSACUG00000000094
Gene type
protein coding
RefSeq status
MODEL
Organism
Athene cunicularia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Strigidae; Athene
Orthologs
human mouse all
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Genomic context

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See ST3GAL6 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
14
Annotation release Status Assembly Chr Location
100 current athCun1 (GCF_003259725.1) 1 Unlocalized Scaffold NW_020799091.1 (120274232..120315231, complement)

NW_020799091.1Genomic Context describing neighboring genes Neighboring gene discoidin, CUB and LCCL domain containing 2 Neighboring gene collagen type VIII alpha 1 chain Neighboring gene uncharacterized LOC113491597 Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene coproporphyrinogen oxidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020799091 Chromosome 1 Unlocalized Scaffold Reference athCun1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactoside alpha-2,3-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
type 2 lactosamine alpha-2,3-sialyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Athene cunicularia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference athCun1

Genomic

  1. NW_020799091.1 Reference athCun1

    Range
    120274232..120315231 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026868611.1 → XP_026724412.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A663LIH5
    Conserved Domains (1) summary
    pfam00777
    Location:100 → 352
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_026868626.1 → XP_026724427.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X2

  3. XM_026868602.1 → XP_026724403.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A663LIH5
    Related
    ENSACUP00000000126.1, ENSACUT00000000135.1
    Conserved Domains (1) summary
    pfam00777
    Location:100 → 352
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  4. XM_026868615.1 → XP_026724416.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A663LIH5
Nucleotide Protein
Heading Accession and Version

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