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B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 [ Athene cunicularia (burrowing owl) ]

Gene ID: 113483221, updated on 3-Aug-2024

Summary

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Gene symbol
B3GNT5
Gene description
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
See related
Ensembl:ENSACUG00000009449
Gene type
protein coding
RefSeq status
MODEL
Organism
Athene cunicularia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Strigidae; Athene
Orthologs
human mouse all
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Genomic context

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See B3GNT5 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
4
Annotation release Status Assembly Chr Location
100 current athCun1 (GCF_003259725.1) 9 Unlocalized Scaffold NW_020799110.1 (10069802..10090035)

NW_020799110.1Genomic Context describing neighboring genes Neighboring gene methylcrotonyl-CoA carboxylase subunit 1 Neighboring gene lysosomal associated membrane protein 3 Neighboring gene MCF.2 cell line derived transforming sequence-like 2 Neighboring gene small nucleolar RNA SNORA63 Neighboring gene replication factor C subunit 4 Neighboring gene eukaryotic translation initiation factor 4A2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020799110 Chromosome 9 Unlocalized Scaffold Reference athCun1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Athene cunicularia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference athCun1

Genomic

  1. NW_020799110.1 Reference athCun1

    Range
    10069802..10090035
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026854550.1 → XP_026710351.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

    UniProtKB/TrEMBL
    A0A663MQV9

  2. XM_026854551.1 → XP_026710352.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

    UniProtKB/TrEMBL
    A0A663MQV9
    Conserved Domains (1) summary
    cl21608
    Location:102 → 298
    Galactosyl_T; Galactosyltransferase

  3. XM_026854553.1 → XP_026710354.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

    UniProtKB/TrEMBL
    A0A663MQV9
    Related
    ENSACUP00000014087.1, ENSACUT00000015018.1
Nucleotide Protein
Heading Accession and Version

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