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SCD stearoyl-CoA desaturase [ Athene cunicularia (burrowing owl) ]

Gene ID: 113481554, updated on 3-Aug-2024

Summary

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Gene symbol
SCD
Gene description
stearoyl-CoA desaturase
See related
Ensembl:ENSACUG00000002403
Gene type
protein coding
RefSeq status
MODEL
Organism
Athene cunicularia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Strigidae; Athene
Orthologs
human all
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Genomic context

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See SCD in Genome Data Viewer
Location:
chromosome: 6
Exon count:
6
Annotation release Status Assembly Chr Location
100 current athCun1 (GCF_003259725.1) 6 Unlocalized Scaffold NW_020799105.1 (5401590..5423207, complement)

NW_020799105.1Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase subunit B8 Neighboring gene SEC31 homolog B, COPII coat complex component Neighboring gene Wnt family member 8B Neighboring gene uncharacterized LOC113481570 Neighboring gene uncharacterized LOC113481541

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020799105 Chromosome 6 Unlocalized Scaffold Reference athCun1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables palmitoyl-CoA 9-desaturase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables stearoyl-CoA 9-desaturase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in response to fatty acid IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in unsaturated fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acyl-CoA desaturase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Athene cunicularia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference athCun1

Genomic

  1. NW_020799105.1 Reference athCun1

    Range
    5401590..5423207 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026851304.1 → XP_026707105.1  acyl-CoA desaturase

    UniProtKB/TrEMBL
    A0A663LV60, A0A663LVG9
    Related
    ENSACUP00000003524.1, ENSACUT00000003751.1
    Conserved Domains (1) summary
    cd03505
    Location:48 → 288
    Delta9-FADS-like; The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like CD includes the delta-9 and delta-11 acyl CoA desaturases found in various eukaryotes including vertebrates, insects, higher plants, and fungi. The delta-9 acyl-lipid desaturases are found in a wide ...
Nucleotide Protein
Heading Accession and Version

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