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ACSL4 acyl-CoA synthetase long chain family member 4 [ Athene cunicularia (burrowing owl) ]

Gene ID: 113479917, updated on 3-Aug-2024

Summary

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Gene symbol
ACSL4
Gene description
acyl-CoA synthetase long chain family member 4
See related
Ensembl:ENSACUG00000005347
Gene type
protein coding
RefSeq status
MODEL
Organism
Athene cunicularia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Strigidae; Athene
Orthologs
human mouse all
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Genomic context

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See ACSL4 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
16
Annotation release Status Assembly Chr Location
100 current athCun1 (GCF_003259725.1) 4 Unlocalized Scaffold NW_020799100.1 (8459761..8478654, complement)

NW_020799100.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113479927 Neighboring gene nuclear transport factor 2 like export factor 2 Neighboring gene transmembrane protein 164 Neighboring gene AMMECR nuclear protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020799100 Chromosome 4 Unlocalized Scaffold Reference athCun1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arachidonate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty-acyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
long-chain-fatty-acid--CoA ligase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Athene cunicularia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference athCun1

Genomic

  1. NW_020799100.1 Reference athCun1

    Range
    8459761..8478654 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026848311.1 → XP_026704112.1  long-chain-fatty-acid--CoA ligase 4 isoform X1

    UniProtKB/TrEMBL
    A0A663M834
    Related
    ENSACUP00000007842.1, ENSACUT00000008386.1
    Conserved Domains (1) summary
    cd05927
    Location:121 → 708
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  2. XM_026848314.1 → XP_026704115.1  long-chain-fatty-acid--CoA ligase 4 isoform X2

  3. XM_026848312.1 → XP_026704113.1  long-chain-fatty-acid--CoA ligase 4 isoform X1

    UniProtKB/TrEMBL
    A0A663M834
    Conserved Domains (1) summary
    cd05927
    Location:121 → 708
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  4. XM_026848313.1 → XP_026704114.1  long-chain-fatty-acid--CoA ligase 4 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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