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UBXN2B UBX domain protein 2B [ Athene cunicularia (burrowing owl) ]

Gene ID: 113476133, updated on 3-Aug-2024

Summary

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Gene symbol
UBXN2B
Gene description
UBX domain protein 2B
See related
Ensembl:ENSACUG00000009660
Gene type
protein coding
RefSeq status
MODEL
Organism
Athene cunicularia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Strigidae; Athene
Orthologs
human mouse all
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Genomic context

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See UBXN2B in Genome Data Viewer
Location:
chromosome: 2
Exon count:
9
Annotation release Status Assembly Chr Location
100 current athCun1 (GCF_003259725.1) 2 Unlocalized Scaffold NW_020799095.1 (113366486..113380209)

NW_020799095.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113476953 Neighboring gene family with sequence similarity 110 member B Neighboring gene cholesterol 7-alpha-monooxygenase Neighboring gene syndecan binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020799095 Chromosome 2 Unlocalized Scaffold Reference athCun1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in membrane fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear membrane reassembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UBX domain-containing protein 2B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Athene cunicularia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference athCun1

Genomic

  1. NW_020799095.1 Reference athCun1

    Range
    113366486..113380209
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026841463.1 → XP_026697264.1  UBX domain-containing protein 2B

    UniProtKB/TrEMBL
    A0A663MRR3
    Related
    ENSACUP00000014381.1, ENSACUT00000015350.1
    Conserved Domains (2) summary
    cd01770
    Location:281 → 357
    p47_UBX; p47-like ubiquitin domain
    smart00553
    Location:166 → 258
    SEP; Domain present in Saccharomyces cerevisiae Shp1, Drosophila melanogaster eyes closed gene (eyc), and vertebrate p47
Nucleotide Protein
Heading Accession and Version

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