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NFYB nuclear transcription factor Y subunit beta [ Pseudonaja textilis ]

Gene ID: 113455384, updated on 15-Mar-2024

Summary

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Gene symbol
NFYB
Gene description
nuclear transcription factor Y subunit beta
See related
Ensembl:ENSPTXG00000008536
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudonaja textilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Pseudonaja
Orthologs
human mouse all
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Genomic context

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See NFYB in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current EBS10Xv2-PRI (GCF_900518735.1) Unplaced Scaffold NW_020769308.1 (15954453..15965117, complement)

NW_020769308.1Genomic Context describing neighboring genes Neighboring gene glycosyltransferase 8 domain containing 2 Neighboring gene thymine DNA glycosylase Neighboring gene host cell factor C2 Neighboring gene thioredoxin reductase 1 Neighboring gene carbohydrate sulfotransferase 11

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020769308 Unplaced Scaffold Reference EBS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CCAAT-binding factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear transcription factor Y subunit beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudonaja textilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EBS10Xv2-PRI

Genomic

  1. NW_020769308.1 Reference EBS10Xv2-PRI

    Range
    15954453..15965117 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026726719.1 → XP_026582504.1  nuclear transcription factor Y subunit beta isoform X1

    UniProtKB/TrEMBL
    A0A670YJS8
    Related
    ENSPTXP00000012125.1, ENSPTXT00000012521.1

  2. XM_026726738.1 → XP_026582523.1  nuclear transcription factor Y subunit beta isoform X2

  3. XM_026726728.1 → XP_026582513.1  nuclear transcription factor Y subunit beta isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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