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DAG1 dystroglycan 1 [ Pseudonaja textilis ]

Gene ID: 113454626, updated on 15-Mar-2024

Summary

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Gene symbol
DAG1
Gene description
dystroglycan 1
See related
Ensembl:ENSPTXG00000013722
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudonaja textilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Pseudonaja
Orthologs
human mouse all
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Genomic context

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See DAG1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current EBS10Xv2-PRI (GCF_900518735.1) Unplaced Scaffold NW_020769311.1 (40998019..41076733, complement)

NW_020769311.1Genomic Context describing neighboring genes Neighboring gene cadherin related family member 4 Neighboring gene inositol hexakisphosphate kinase 1 Neighboring gene early growth response 1 Neighboring gene receptor accessory protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020769311 Unplaced Scaffold Reference EBS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables laminin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in morphogenesis of an epithelium IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in muscle attachment IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nerve development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in basement membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of dystroglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of dystrophin-associated glycoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dystroglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudonaja textilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EBS10Xv2-PRI

Genomic

  1. NW_020769311.1 Reference EBS10Xv2-PRI

    Range
    40998019..41076733 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026725985.1 → XP_026581770.1  dystroglycan

    UniProtKB/TrEMBL
    A0A670ZEK3
    Related
    ENSPTXP00000019836.1, ENSPTXT00000020439.1
    Conserved Domains (4) summary
    cd11303
    Location:65 → 166
    Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
    cd11305
    Location:184 → 307
    alpha_DG_C; C-terminal domain of alpha dystroglycan
    pfam05454
    Location:603 → 891
    DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
    cl26247
    Location:316 → 426
    DNA_pol3_delta2; DNA polymerase III, delta subunit

  2. XM_026725990.1 → XP_026581775.1  dystroglycan

    UniProtKB/TrEMBL
    A0A670ZEK3
    Conserved Domains (4) summary
    cd11303
    Location:65 → 166
    Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
    cd11305
    Location:184 → 307
    alpha_DG_C; C-terminal domain of alpha dystroglycan
    pfam05454
    Location:603 → 891
    DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
    cl26247
    Location:316 → 426
    DNA_pol3_delta2; DNA polymerase III, delta subunit

  3. XM_026725997.1 → XP_026581782.1  dystroglycan

    UniProtKB/TrEMBL
    A0A670ZEK3
    Conserved Domains (4) summary
    cd11303
    Location:65 → 166
    Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
    cd11305
    Location:184 → 307
    alpha_DG_C; C-terminal domain of alpha dystroglycan
    pfam05454
    Location:603 → 891
    DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
    cl26247
    Location:316 → 426
    DNA_pol3_delta2; DNA polymerase III, delta subunit

  4. XM_026726004.1 → XP_026581789.1  dystroglycan

    UniProtKB/TrEMBL
    A0A670ZEK3
    Conserved Domains (4) summary
    cd11303
    Location:65 → 166
    Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
    cd11305
    Location:184 → 307
    alpha_DG_C; C-terminal domain of alpha dystroglycan
    pfam05454
    Location:603 → 891
    DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
    cl26247
    Location:316 → 426
    DNA_pol3_delta2; DNA polymerase III, delta subunit
Nucleotide Protein
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