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LOC113451204 polypeptide N-acetylgalactosaminyltransferase 4-like [ Pseudonaja textilis ]

Gene ID: 113451204, updated on 23-Oct-2023

Summary

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Gene symbol
LOC113451204
Gene description
polypeptide N-acetylgalactosaminyltransferase 4-like
See related
Ensembl:ENSPTXG00000018687
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudonaja textilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Pseudonaja
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Genomic context

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See LOC113451204 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current EBS10Xv2-PRI (GCF_900518735.1) Unplaced Scaffold NW_020769540.1 (154190..157837)

NW_020769540.1Genomic Context describing neighboring genes Neighboring gene EH domain-containing protein 3 Neighboring gene HIG1 domain family member 1A, mitochondrial-like Neighboring gene 3'(2'), 5'-bisphosphate nucleotidase 2 Neighboring gene cell division cycle 25A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020769540 Unplaced Scaffold Reference EBS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudonaja textilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EBS10Xv2-PRI

Genomic

  1. NW_020769540.1 Reference EBS10Xv2-PRI

    Range
    154190..157837
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026722573.1 → XP_026578358.1  polypeptide N-acetylgalactosaminyltransferase 4-like

    UniProtKB/TrEMBL
    A0A670ZWH1
    Conserved Domains (2) summary
    cd02510
    Location:137 → 431
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:445 → 573
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_026722572.1 → XP_026578357.1  polypeptide N-acetylgalactosaminyltransferase 4-like

    UniProtKB/TrEMBL
    A0A670ZWH1
    Related
    ENSPTXP00000027079.1, ENSPTXT00000027911.1
    Conserved Domains (2) summary
    cd02510
    Location:137 → 431
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:445 → 573
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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