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TCAP titin-cap [ Pseudonaja textilis ]

Gene ID: 113447376, updated on 15-Mar-2024

Summary

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Gene symbol
TCAP
Gene description
titin-cap
See related
Ensembl:ENSPTXG00000008463
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudonaja textilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Pseudonaja
Orthologs
human mouse all
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Genomic context

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See TCAP in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current EBS10Xv2-PRI (GCF_900518735.1) Unplaced Scaffold NW_020769403.1 (1545037..1548574, complement)

NW_020769403.1Genomic Context describing neighboring genes Neighboring gene StAR related lipid transfer domain containing 3 Neighboring gene melanoregulin Neighboring gene phenylethanolamine N-methyltransferase Neighboring gene post-GPI attachment to proteins phospholipase 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020769403 Unplaced Scaffold Reference EBS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-macromolecule adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of muscle IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables titin Z domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables titin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cardiac muscle contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cardiac muscle tissue morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cardiac myofibril assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in detection of muscle stretch IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sarcomerogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in skeletal muscle contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in skeletal muscle myosin thick filament assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in skeletal muscle thin filament assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Z disc IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
telethonin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudonaja textilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EBS10Xv2-PRI

Genomic

  1. NW_020769403.1 Reference EBS10Xv2-PRI

    Range
    1545037..1548574 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026717533.1 → XP_026573318.1  telethonin

    UniProtKB/TrEMBL
    A0A670YJD3
    Related
    ENSPTXP00000011995.1, ENSPTXT00000012389.1
    Conserved Domains (1) summary
    pfam09470
    Location:30 → 173
    Telethonin; Telethonin protein
Nucleotide Protein
Heading Accession and Version

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