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LCAT lecithin-cholesterol acyltransferase [ Pseudonaja textilis ]

Gene ID: 113445308, updated on 15-Mar-2024

Summary

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Gene symbol
LCAT
Gene description
lecithin-cholesterol acyltransferase
See related
Ensembl:ENSPTXG00000007020
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudonaja textilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Pseudonaja
Orthologs
human mouse all
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Genomic context

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See LCAT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current EBS10Xv2-PRI (GCF_900518735.1) Unplaced Scaffold NW_020769377.1 (4673860..4684967, complement)

NW_020769377.1Genomic Context describing neighboring genes Neighboring gene cytosolic iron-sulfur assembly component 2B Neighboring gene microtubule associated tyrosine carboxypeptidase 1 Neighboring gene SNF-related serine/threonine-protein kinase-like Neighboring gene agouti related neuropeptide

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020769377 Unplaced Scaffold Reference EBS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylcholine-sterol O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylcholine-sterol acyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudonaja textilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EBS10Xv2-PRI

Genomic

  1. NW_020769377.1 Reference EBS10Xv2-PRI

    Range
    4673860..4684967 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026714424.1 → XP_026570209.1  phosphatidylcholine-sterol acyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A670YJV8
    Related
    ENSPTXP00000009818.1, ENSPTXT00000010156.1
    Conserved Domains (1) summary
    cl21494
    Location:81 → 406
    Abhydrolase; alpha/beta hydrolases

  2. XM_026714425.1 → XP_026570210.1  phosphatidylcholine-sterol acyltransferase isoform X2

    Conserved Domains (1) summary
    cl21494
    Location:11 → 336
    Abhydrolase; alpha/beta hydrolases
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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