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FAN1 FANCD2 and FANCI associated nuclease 1 [ Pseudonaja textilis ]

Gene ID: 113442335, updated on 15-Mar-2024

Summary

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Gene symbol
FAN1
Gene description
FANCD2 and FANCI associated nuclease 1
See related
Ensembl:ENSPTXG00000012645
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudonaja textilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Pseudonaja
Orthologs
human mouse all
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Genomic context

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See FAN1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current EBS10Xv2-PRI (GCF_900518735.1) Unplaced Scaffold NW_020769352.1 (9060517..9074040)

NW_020769352.1Genomic Context describing neighboring genes Neighboring gene methylmalonyl-CoA epimerase Neighboring gene M-phase phosphoprotein 10 Neighboring gene uncharacterized LOC113442337 Neighboring gene myotubularin related protein 10

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020769352 Unplaced Scaffold Reference EBS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5'-3' exonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables 5'-flap endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables flap-structured DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in interstrand cross-link repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fanconi-associated nuclease 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudonaja textilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EBS10Xv2-PRI

Genomic

  1. NW_020769352.1 Reference EBS10Xv2-PRI

    Range
    9060517..9074040
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026709853.1 → XP_026565638.1  fanconi-associated nuclease 1

    UniProtKB/TrEMBL
    A0A670Z364
    Related
    ENSPTXP00000018355.1, ENSPTXT00000018907.1
    Conserved Domains (3) summary
    smart00734
    Location:55 → 75
    ZnF_Rad18; Rad18-like CCHC zinc finger
    smart00990
    Location:904 → 1019
    VRR_NUC; This model contains proteins with the VRR-NUC domain
    cl28410
    Location:3 → 134
    RAD18; RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]
Nucleotide Protein
Heading Accession and Version

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