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FANCC FA complementation group C [ Pseudonaja textilis ]

Gene ID: 113438494, updated on 15-Mar-2024

Summary

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Gene symbol
FANCC
Gene description
FA complementation group C
See related
Ensembl:ENSPTXG00000011187
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudonaja textilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Pseudonaja
Orthologs
human mouse all
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Genomic context

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See FANCC in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current EBS10Xv2-PRI (GCF_900518735.1) Unplaced Scaffold NW_020769331.1 (10875756..10929039, complement)

NW_020769331.1Genomic Context describing neighboring genes Neighboring gene fructose-1,6-bisphosphatase 1-like Neighboring gene aminopeptidase O (putative) Neighboring gene patched 1 Neighboring gene ERCC excision repair 6 like 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020769331 Unplaced Scaffold Reference EBS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cellular response to oxidative stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in interstrand cross-link repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Fanconi anaemia nuclear complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Fanconi anemia group C protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudonaja textilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EBS10Xv2-PRI

Genomic

  1. NW_020769331.1 Reference EBS10Xv2-PRI

    Range
    10875756..10929039 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026703895.1 → XP_026559680.1  Fanconi anemia group C protein

    UniProtKB/TrEMBL
    A0A670Z538
    Conserved Domains (1) summary
    pfam02106
    Location:10 → 553
    Fanconi_C; Fanconi anaemia group C protein

  2. XM_026703894.1 → XP_026559679.1  Fanconi anemia group C protein

    UniProtKB/TrEMBL
    A0A670Z538
    Related
    ENSPTXP00000016171.1, ENSPTXT00000016667.1
    Conserved Domains (1) summary
    pfam02106
    Location:10 → 553
    Fanconi_C; Fanconi anaemia group C protein

  3. XM_026703893.1 → XP_026559678.1  Fanconi anemia group C protein

    UniProtKB/TrEMBL
    A0A670Z538
    Conserved Domains (1) summary
    pfam02106
    Location:10 → 553
    Fanconi_C; Fanconi anaemia group C protein
Nucleotide Protein
Heading Accession and Version

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