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FAAP100 FA core complex associated protein 100 [ Pseudonaja textilis ]

Gene ID: 113437012, updated on 15-Mar-2024

Summary

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Gene symbol
FAAP100
Gene description
FA core complex associated protein 100
See related
Ensembl:ENSPTXG00000005297
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudonaja textilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Pseudonaja
Orthologs
human mouse all
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Genomic context

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See FAAP100 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current EBS10Xv2-PRI (GCF_900518735.1) Unplaced Scaffold NW_020769325.1 (4007879..4036837)

NW_020769325.1Genomic Context describing neighboring genes Neighboring gene tetraspanin 10 Neighboring gene NPL4 homolog, ubiquitin recognition factor Neighboring gene fascin actin-bundling protein 2, retinal Neighboring gene uncharacterized LOC113437015

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020769325 Unplaced Scaffold Reference EBS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in interstrand cross-link repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Fanconi anaemia nuclear complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Fanconi anemia core complex-associated protein 100

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudonaja textilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EBS10Xv2-PRI

Genomic

  1. NW_020769325.1 Reference EBS10Xv2-PRI

    Range
    4007879..4036837
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026701754.1 → XP_026557539.1  Fanconi anemia core complex-associated protein 100

    UniProtKB/TrEMBL
    A0A670YFF1
    Conserved Domains (1) summary
    pfam15146
    Location:437 → 874
    FANCAA; Fanconi anemia-associated

  2. XM_026701755.1 → XP_026557540.1  Fanconi anemia core complex-associated protein 100

    UniProtKB/TrEMBL
    A0A670YFF1
    Related
    ENSPTXP00000007290.1, ENSPTXT00000007535.1
    Conserved Domains (1) summary
    pfam15146
    Location:437 → 874
    FANCAA; Fanconi anemia-associated
Nucleotide Protein
Heading Accession and Version

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