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FANCM FA complementation group M [ Pseudonaja textilis ]

Gene ID: 113435159, updated on 15-Mar-2024

Summary

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Gene symbol
FANCM
Gene description
FA complementation group M
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudonaja textilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Pseudonaja
Orthologs
human mouse all
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Genomic context

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See FANCM in Genome Data Viewer
Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
100 current EBS10Xv2-PRI (GCF_900518735.1) Unplaced Scaffold NW_020769318.1 (15258317..15297396, complement)

NW_020769318.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113434951 Neighboring gene MIS18 binding protein 1 Neighboring gene small nucleolar RNA SNORD127 Neighboring gene FKBP prolyl isomerase 3 Neighboring gene pre-mRNA processing factor 39 Neighboring gene TOG array regulator of axonemal microtubules 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020769318 Unplaced Scaffold Reference EBS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-5' DNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables four-way junction DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables four-way junction helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via synthesis-dependent strand annealing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in interstrand cross-link repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in replication fork reversal IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Fanconi anemia group M protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudonaja textilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EBS10Xv2-PRI

Genomic

  1. NW_020769318.1 Reference EBS10Xv2-PRI

    Range
    15258317..15297396 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026698794.1 → XP_026554579.1  Fanconi anemia group M protein

    Conserved Domains (4) summary
    pfam09444
    Location:1479 → 1559
    MRC1; MRC1-like domain
    pfam16783
    Location:672 → 785
    FANCM-MHF_bd; FANCM to MHF binding domain
    cl17041
    Location:69 → 620
    helicase_insert_domain
    cl27383
    Location:1765 → 1971
    ERCC4; ERCC4 domain
Nucleotide Protein
Heading Accession and Version

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