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COLEC11 collectin subfamily member 11 [ Pseudonaja textilis ]

Gene ID: 113432957, updated on 15-Mar-2024

Summary

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Gene symbol
COLEC11
Gene description
collectin subfamily member 11
See related
Ensembl:ENSPTXG00000010922
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudonaja textilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Pseudonaja
Orthologs
human mouse all
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Genomic context

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See COLEC11 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current EBS10Xv2-PRI (GCF_900518735.1) Unplaced Scaffold NW_020769312.1 (32662841..32677496)

NW_020769312.1Genomic Context describing neighboring genes Neighboring gene ribonuclease H1 Neighboring gene ribosomal protein S7 Neighboring gene doublecortin domain containing 2C Neighboring gene SRY-box transcription factor 11

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020769312 Unplaced Scaffold Reference EBS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
collectin-11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudonaja textilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EBS10Xv2-PRI

Genomic

  1. NW_020769312.1 Reference EBS10Xv2-PRI

    Range
    32662841..32677496
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026695252.1 → XP_026551037.1  collectin-11 isoform X1

    Conserved Domains (2) summary
    cd03591
    Location:192 → 307
    CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)
    pfam01391
    Location:75 → 115
    Collagen; Collagen triple helix repeat (20 copies)

  2. XM_026695253.1 → XP_026551038.1  collectin-11 isoform X2

    Conserved Domains (2) summary
    cd03591
    Location:186 → 301
    CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)
    pfam01391
    Location:75 → 115
    Collagen; Collagen triple helix repeat (20 copies)

  3. XM_026695255.1 → XP_026551040.1  collectin-11 isoform X3

    UniProtKB/TrEMBL
    A0A670YVL3

  4. XM_026695256.1 → XP_026551041.1  collectin-11 isoform X4

    UniProtKB/TrEMBL
    A0A670YVL3, A0A670Z258
    Related
    ENSPTXP00000015838.1, ENSPTXT00000016319.1
Nucleotide Protein
Heading Accession and Version

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