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LOC113428632 kin of IRRE-like protein 1 [ Notechis scutatus (mainland tiger snake) ]

Gene ID: 113428632, updated on 23-Oct-2023

Summary

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Gene symbol
LOC113428632
Gene description
kin of IRRE-like protein 1
See related
Ensembl:ENSNSUG00000005999
Gene type
protein coding
RefSeq status
MODEL
Organism
Notechis scutatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Notechis
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Genomic context

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See LOC113428632 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current TS10Xv2-PRI (GCF_900518725.1) Unplaced Scaffold NW_020718249.1 (14555..22919)

NW_020718249.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020718249 Unplaced Scaffold Reference TS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notechis scutatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TS10Xv2-PRI

Genomic

  1. NW_020718249.1 Reference TS10Xv2-PRI

    Range
    14555..22919
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026691186.1 → XP_026546971.1  kin of IRRE-like protein 1

    UniProtKB/TrEMBL
    A0A6J1VV59
    Related
    ENSNSUP00000007635.1, ENSNSUT00000008187.1
    Conserved Domains (5) summary
    cd05898
    Location:330 → 427
    Ig5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein (also known as Neph2)
    smart00409
    Location:12 → 55
    IG; Immunoglobulin
    pfam13895
    Location:165 → 234
    Ig_2; Immunoglobulin domain
    pfam13927
    Location:247 → 312
    Ig_3; Immunoglobulin domain
    cl11960
    Location:77 → 158
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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