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SDC2 syndecan 2 [ Notechis scutatus (mainland tiger snake) ]

Gene ID: 113428057, updated on 15-Mar-2024

Summary

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Gene symbol
SDC2
Gene description
syndecan 2
See related
Ensembl:ENSNSUG00000012725
Gene type
protein coding
RefSeq status
MODEL
Organism
Notechis scutatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Notechis
Orthologs
human mouse all
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Genomic context

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See SDC2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current TS10Xv2-PRI (GCF_900518725.1) Unplaced Scaffold NW_020716616.1 (10078909..10145345, complement)

NW_020716616.1Genomic Context describing neighboring genes Neighboring gene metadherin Neighboring gene carboxypeptidase Q Neighboring gene phosphatidylserine synthase 1 Neighboring gene mitochondrial transcription termination factor 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020716616 Unplaced Scaffold Reference TS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
syndecan-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notechis scutatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TS10Xv2-PRI

Genomic

  1. NW_020716616.1 Reference TS10Xv2-PRI

    Range
    10078909..10145345 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026690624.1 → XP_026546409.1  syndecan-2

    UniProtKB/TrEMBL
    A0A6J1W206
    Related
    ENSNSUP00000017336.1, ENSNSUT00000018451.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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