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LOC113426644 polypeptide N-acetylgalactosaminyltransferase 4-like [ Notechis scutatus (mainland tiger snake) ]

Gene ID: 113426644, updated on 23-Oct-2023

Summary

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Gene symbol
LOC113426644
Gene description
polypeptide N-acetylgalactosaminyltransferase 4-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Notechis scutatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Notechis
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Genomic context

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See LOC113426644 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current TS10Xv2-PRI (GCF_900518725.1) Unplaced Scaffold NW_020717112.1 (182260..185923)

NW_020717112.1Genomic Context describing neighboring genes Neighboring gene EH domain-containing protein 3 Neighboring gene HIG1 domain family member 1A, mitochondrial-like Neighboring gene uncharacterized LOC113426646 Neighboring gene 3'(2'), 5'-bisphosphate nucleotidase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020717112 Unplaced Scaffold Reference TS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notechis scutatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TS10Xv2-PRI

Genomic

  1. NW_020717112.1 Reference TS10Xv2-PRI

    Range
    182260..185923
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026689035.1 → XP_026544820.1  polypeptide N-acetylgalactosaminyltransferase 4-like

    UniProtKB/TrEMBL
    A0A6J1VP79
    Conserved Domains (2) summary
    cd02510
    Location:137 → 431
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:445 → 573
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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