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LOC113426149 beta-1,3-galactosyltransferase 1 [ Notechis scutatus (mainland tiger snake) ]

Gene ID: 113426149, updated on 23-Oct-2023

Summary

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Gene symbol
LOC113426149
Gene description
beta-1,3-galactosyltransferase 1
See related
Ensembl:ENSNSUG00000008284
Gene type
protein coding
RefSeq status
MODEL
Organism
Notechis scutatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Notechis
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Genomic context

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See LOC113426149 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current TS10Xv2-PRI (GCF_900518725.1) Unplaced Scaffold NW_020717044.1 (7003..134876)

NW_020717044.1Genomic Context describing neighboring genes Neighboring gene STE20/SPS1-related proline-alanine-rich protein kinase Neighboring gene uncharacterized LOC113426151

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020717044 Unplaced Scaffold Reference TS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notechis scutatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TS10Xv2-PRI

Genomic

  1. NW_020717044.1 Reference TS10Xv2-PRI

    Range
    7003..134876
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026688503.1 → XP_026544288.1  beta-1,3-galactosyltransferase 1

    UniProtKB/TrEMBL
    A0A6J1VIB1
    Related
    ENSNSUP00000010931.1, ENSNSUT00000011660.1
    Conserved Domains (1) summary
    pfam01762
    Location:96 → 283
    Galactosyl_T; Galactosyltransferase

RNA

  1. XR_003372659.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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