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NGLY1 N-glycanase 1 [ Notechis scutatus (mainland tiger snake) ]

Gene ID: 113426108, updated on 15-Mar-2024

Summary

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Gene symbol
NGLY1
Gene description
N-glycanase 1
See related
Ensembl:ENSNSUG00000007799
Gene type
protein coding
RefSeq status
MODEL
Organism
Notechis scutatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Notechis
Orthologs
human mouse all
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Genomic context

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See NGLY1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current TS10Xv2-PRI (GCF_900518725.1) Unplaced Scaffold NW_020717036.1 (107758..137781)

NW_020717036.1Genomic Context describing neighboring genes Neighboring gene 3-oxoacyl-ACP synthase, mitochondrial Neighboring gene DNA topoisomerase II beta Neighboring gene retinoic acid receptor beta

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020717036 Unplaced Scaffold Reference TS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycoprotein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein deglycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein quality control for misfolded or incompletely synthesized proteins IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notechis scutatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TS10Xv2-PRI

Genomic

  1. NW_020717036.1 Reference TS10Xv2-PRI

    Range
    107758..137781
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026688447.1 → XP_026544232.1  peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase isoform X2

    UniProtKB/TrEMBL
    A0A6J1VM67
    Related
    ENSNSUP00000010253.1, ENSNSUT00000010936.1
    Conserved Domains (4) summary
    pfam03835
    Location:155 → 208
    Rad4; Rad4 transglutaminase-like domain
    pfam01841
    Location:92 → 170
    Transglut_core; Transglutaminase-like superfamily
    pfam04721
    Location:274 → 467
    PAW; PNGase C-terminal domain, mannose-binding module PAW
    cl12013
    Location:211 → 257
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

  2. XM_026688444.1 → XP_026544229.1  peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase isoform X1

    UniProtKB/TrEMBL
    A0A6J1VW67
    Conserved Domains (4) summary
    pfam03835
    Location:199 → 252
    Rad4; Rad4 transglutaminase-like domain
    pfam01841
    Location:136 → 214
    Transglut_core; Transglutaminase-like superfamily
    pfam04721
    Location:318 → 511
    PAW; PNGase C-terminal domain, mannose-binding module PAW
    cl12013
    Location:255 → 301
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

  3. XM_026688446.1 → XP_026544231.1  peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase isoform X1

    UniProtKB/TrEMBL
    A0A6J1VW67
    Conserved Domains (4) summary
    pfam03835
    Location:199 → 252
    Rad4; Rad4 transglutaminase-like domain
    pfam01841
    Location:136 → 214
    Transglut_core; Transglutaminase-like superfamily
    pfam04721
    Location:318 → 511
    PAW; PNGase C-terminal domain, mannose-binding module PAW
    cl12013
    Location:255 → 301
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
Nucleotide Protein
Heading Accession and Version

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