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PPT2 palmitoyl-protein thioesterase 2 [ Notechis scutatus (mainland tiger snake) ]

Gene ID: 113425454, updated on 15-Mar-2024

Summary

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Gene symbol
PPT2
Gene description
palmitoyl-protein thioesterase 2
See related
Ensembl:ENSNSUG00000005676
Gene type
protein coding
RefSeq status
MODEL
Organism
Notechis scutatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Notechis
Orthologs
human mouse all
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Genomic context

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See PPT2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current TS10Xv2-PRI (GCF_900518725.1) Unplaced Scaffold NW_020716976.1 (168665..238354)

NW_020716976.1Genomic Context describing neighboring genes Neighboring gene carnitine O-acetyltransferase-like Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC113425452 Neighboring gene solute carrier family 44 member 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020716976 Unplaced Scaffold Reference TS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables thiolester hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysosomal thioesterase PPT2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notechis scutatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TS10Xv2-PRI

Genomic

  1. NW_020716976.1 Reference TS10Xv2-PRI

    Range
    168665..238354
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026687614.1 → XP_026543399.1  lysosomal thioesterase PPT2

    UniProtKB/TrEMBL
    A0A6J1VJR5
    Conserved Domains (1) summary
    cl21494
    Location:10 → 266
    Abhydrolase; alpha/beta hydrolases

  2. XM_026687617.1 → XP_026543402.1  lysosomal thioesterase PPT2

    UniProtKB/TrEMBL
    A0A6J1VJR5
    Conserved Domains (1) summary
    cl21494
    Location:10 → 266
    Abhydrolase; alpha/beta hydrolases

  3. XM_026687615.1 → XP_026543400.1  lysosomal thioesterase PPT2

    UniProtKB/TrEMBL
    A0A6J1VJR5
    Conserved Domains (1) summary
    cl21494
    Location:10 → 266
    Abhydrolase; alpha/beta hydrolases

  4. XM_026687616.1 → XP_026543401.1  lysosomal thioesterase PPT2

    UniProtKB/TrEMBL
    A0A6J1VJR5
    Related
    ENSNSUP00000007185.1, ENSNSUT00000007701.1
    Conserved Domains (1) summary
    cl21494
    Location:10 → 266
    Abhydrolase; alpha/beta hydrolases

RNA

  1. XR_003372599.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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