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SLC27A5 solute carrier family 27 member 5 [ Notechis scutatus (mainland tiger snake) ]

Gene ID: 113424388, updated on 11-Apr-2024

Summary

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Gene symbol
SLC27A5
Gene description
solute carrier family 27 member 5
See related
Ensembl:ENSNSUG00000008411
Gene type
protein coding
RefSeq status
MODEL
Organism
Notechis scutatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Notechis
Orthologs
human mouse all
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Genomic context

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See SLC27A5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current TS10Xv2-PRI (GCF_900518725.1) Unplaced Scaffold NW_020716886.1 (82090..115187, complement)

NW_020716886.1Genomic Context describing neighboring genes Neighboring gene erythroid membrane-associated protein-like Neighboring gene zinc finger and BTB domain containing 45 Neighboring gene zinc finger protein 239-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020716886 Unplaced Scaffold Reference TS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables long-chain fatty acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables long-chain fatty acid-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bile acyl-CoA synthetase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notechis scutatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TS10Xv2-PRI

Genomic

  1. NW_020716886.1 Reference TS10Xv2-PRI

    Range
    82090..115187 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026686059.1 → XP_026541844.1  bile acyl-CoA synthetase isoform X2

    UniProtKB/TrEMBL
    A0A6J1VPD9
    Conserved Domains (1) summary
    cl17068
    Location:76 → 567
    AFD_class_I; Adenylate forming domain, Class I superfamily

  2. XM_026686058.1 → XP_026541843.1  bile acyl-CoA synthetase isoform X1

    UniProtKB/TrEMBL
    A0A6J1VMM3
    Related
    ENSNSUP00000011142.1, ENSNSUT00000011878.1
    Conserved Domains (1) summary
    cl17068
    Location:76 → 610
    AFD_class_I; Adenylate forming domain, Class I superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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