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CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 [ Notechis scutatus (mainland tiger snake) ]

Gene ID: 113420104, updated on 15-Mar-2024

Summary

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Gene symbol
CSGALNACT1
Gene description
chondroitin sulfate N-acetylgalactosaminyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Notechis scutatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Notechis
Orthologs
human mouse all
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Genomic context

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See CSGALNACT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current TS10Xv2-PRI (GCF_900518725.1) Unplaced Scaffold NW_020716732.1 (3082846..3123736, complement)

NW_020716732.1Genomic Context describing neighboring genes Neighboring gene USO1 vesicle transport factor Neighboring gene SH2 domain containing 4A Neighboring gene integrator complex subunit 10

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020716732 Unplaced Scaffold Reference TS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate N-acetylgalactosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notechis scutatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TS10Xv2-PRI

Genomic

  1. NW_020716732.1 Reference TS10Xv2-PRI

    Range
    3082846..3123736 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026679897.1 → XP_026535682.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A6J1UXC4

  2. XM_026679896.1 → XP_026535681.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6J1UZ34

  3. XM_026679895.1 → XP_026535680.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6J1UZ34
Nucleotide Protein
Heading Accession and Version

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