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TJP2 tight junction protein 2 [ Notechis scutatus (mainland tiger snake) ]

Gene ID: 113417190, updated on 15-Mar-2024

Summary

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Gene symbol
TJP2
Gene description
tight junction protein 2
See related
Ensembl:ENSNSUG00000017855
Gene type
protein coding
RefSeq status
MODEL
Organism
Notechis scutatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Notechis
Orthologs
human mouse all
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Genomic context

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See TJP2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
100 current TS10Xv2-PRI (GCF_900518725.1) Unplaced Scaffold NW_020716612.1 (33236463..33308761, complement)

NW_020716612.1Genomic Context describing neighboring genes Neighboring gene amyloid beta precursor protein binding family A member 1 Neighboring gene endosomal transmembrane epsin interactor 1 Neighboring gene uncharacterized LOC113417208 Neighboring gene frataxin Neighboring gene phosphatidylinositol-4-phosphate 5-kinase type 1 beta

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020716612 Unplaced Scaffold Reference TS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of endothelial intestinal barrier IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of blood-brain barrier permeability IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tight junction protein ZO-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notechis scutatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TS10Xv2-PRI

Genomic

  1. NW_020716612.1 Reference TS10Xv2-PRI

    Range
    33236463..33308761 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026675459.1 → XP_026531244.1  tight junction protein ZO-2

    UniProtKB/TrEMBL
    A0A6J1UUB6
    Related
    ENSNSUP00000024997.1, ENSNSUT00000026563.1

  2. XM_026675444.1 → XP_026531229.1  tight junction protein ZO-2

    UniProtKB/TrEMBL
    A0A6J1UUB6

  3. XM_026675452.1 → XP_026531237.1  tight junction protein ZO-2

    UniProtKB/TrEMBL
    A0A6J1UUB6
Nucleotide Protein
Heading Accession and Version

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