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AMPD1 adenosine monophosphate deaminase 1 [ Notechis scutatus (mainland tiger snake) ]

Gene ID: 113416962, updated on 15-Mar-2024

Summary

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Gene symbol
AMPD1
Gene description
adenosine monophosphate deaminase 1
See related
Ensembl:ENSNSUG00000013666
Gene type
protein coding
RefSeq status
MODEL
Organism
Notechis scutatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Notechis
Orthologs
human mouse all
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Genomic context

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See AMPD1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current TS10Xv2-PRI (GCF_900518725.1) Unplaced Scaffold NW_020716680.1 (374792..394209)

NW_020716680.1Genomic Context describing neighboring genes Neighboring gene cold shock domain containing E1 Neighboring gene NRAS proto-oncogene, GTPase Neighboring gene DENN domain containing 2C Neighboring gene BCAS2 pre-mRNA processing factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020716680 Unplaced Scaffold Reference TS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables AMP deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in AMP metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in IMP salvage IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AMP deaminase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notechis scutatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TS10Xv2-PRI

Genomic

  1. NW_020716680.1 Reference TS10Xv2-PRI

    Range
    374792..394209
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026675108.1 → XP_026530893.1  AMP deaminase 1

    UniProtKB/TrEMBL
    A0A6J1UQW3
    Related
    ENSNSUP00000018718.1, ENSNSUT00000019919.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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