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LOC113416559 integrin beta-6-like [ Notechis scutatus (mainland tiger snake) ]

Gene ID: 113416559, updated on 23-Oct-2023

Summary

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Gene symbol
LOC113416559
Gene description
integrin beta-6-like
See related
Ensembl:ENSNSUG00000020568
Gene type
protein coding
RefSeq status
MODEL
Organism
Notechis scutatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Notechis
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Genomic context

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See LOC113416559 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current TS10Xv2-PRI (GCF_900518725.1) Unplaced Scaffold NW_020716674.1 (4031557..4075251)

NW_020716674.1Genomic Context describing neighboring genes Neighboring gene TRAF family member-associated NF-kappa-B activator-like Neighboring gene RNA-binding motif, single-stranded-interacting protein 1 Neighboring gene secretory phospholipase A2 receptor-like Neighboring gene lymphocyte antigen 75-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020716674 Unplaced Scaffold Reference TS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion mediated by integrin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in integrin-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of integrin alphav-beta6 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integrin beta-6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notechis scutatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TS10Xv2-PRI

Genomic

  1. NW_020716674.1 Reference TS10Xv2-PRI

    Range
    4031557..4075251
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026674546.1 → XP_026530331.1  integrin beta-6-like isoform X1

    UniProtKB/TrEMBL
    A0A6J1UHF8

  2. XM_026674547.1 → XP_026530332.1  integrin beta-6-like isoform X2

    UniProtKB/TrEMBL
    A0A6J1UHF6
    Related
    ENSNSUP00000028983.1, ENSNSUT00000030774.1
Nucleotide Protein
Heading Accession and Version

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