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COL5A3 collagen type V alpha 3 chain [ Notechis scutatus (mainland tiger snake) ]

Gene ID: 113416139, updated on 15-Mar-2024

Summary

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Gene symbol
COL5A3
Gene description
collagen type V alpha 3 chain
Gene type
protein coding
RefSeq status
MODEL
Organism
Notechis scutatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Notechis
Orthologs
human mouse all
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Genomic context

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See COL5A3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
67
Annotation release Status Assembly Chr Location
100 current TS10Xv2-PRI (GCF_900518725.1) Unplaced Scaffold NW_020716668.1 (1422755..1557553, complement)

NW_020716668.1Genomic Context describing neighboring genes Neighboring gene microtubule-associated proteins 1A/1B light chain 3C-like Neighboring gene olfactomedin 2 Neighboring gene histone H4 Neighboring gene retinol dehydrogenase 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020716668 Unplaced Scaffold Reference TS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix structural constituent IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
collagen alpha-3(V) chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notechis scutatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TS10Xv2-PRI

Genomic

  1. NW_020716668.1 Reference TS10Xv2-PRI

    Range
    1422755..1557553 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026673854.1 → XP_026529639.1  collagen alpha-3(V) chain

    UniProtKB/TrEMBL
    A0A6J1UPH2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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