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CHST3 carbohydrate sulfotransferase 3 [ Notechis scutatus (mainland tiger snake) ]

Gene ID: 113415365, updated on 15-Mar-2024

Summary

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Gene symbol
CHST3
Gene description
carbohydrate sulfotransferase 3
See related
Ensembl:ENSNSUG00000015129
Gene type
protein coding
RefSeq status
MODEL
Organism
Notechis scutatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Notechis
Orthologs
human mouse all
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Genomic context

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See CHST3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current TS10Xv2-PRI (GCF_900518725.1) Unplaced Scaffold NW_020716658.1 (6366504..6369824, complement)

NW_020716658.1Genomic Context describing neighboring genes Neighboring gene collagen type XIII alpha 1 chain Neighboring gene U6 spliceosomal RNA Neighboring gene core histone macro-H2A.2 Neighboring gene AIF family member 2 Neighboring gene prosaposin-like Neighboring gene prosaposin-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020716658 Unplaced Scaffold Reference TS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chondroitin 6-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notechis scutatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TS10Xv2-PRI

Genomic

  1. NW_020716658.1 Reference TS10Xv2-PRI

    Range
    6366504..6369824 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026672724.1 → XP_026528509.1  carbohydrate sulfotransferase 3

    UniProtKB/TrEMBL
    A0A6J1UKZ1
    Related
    ENSNSUP00000020794.1, ENSNSUT00000022118.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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