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JUP junction plakoglobin [ Notechis scutatus (mainland tiger snake) ]

Gene ID: 113413531, updated on 15-Mar-2024

Summary

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Gene symbol
JUP
Gene description
junction plakoglobin
See related
Ensembl:ENSNSUG00000012750
Gene type
protein coding
RefSeq status
MODEL
Organism
Notechis scutatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Notechis
Orthologs
human mouse all
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Genomic context

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See JUP in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current TS10Xv2-PRI (GCF_900518725.1) Unplaced Scaffold NW_020716640.1 (9841707..9895476, complement)

NW_020716640.1Genomic Context describing neighboring genes Neighboring gene trafficking kinesin-binding protein 1-like Neighboring gene uncharacterized LOC113413533 Neighboring gene uncharacterized LOC113413532 Neighboring gene gastrin/cholecystokinin-like peptide Neighboring gene prolyl 3-hydroxylase family member 4 (inactive)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020716640 Unplaced Scaffold Reference TS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-catenin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein phosphatase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of catenin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
junction plakoglobin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notechis scutatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TS10Xv2-PRI

Genomic

  1. NW_020716640.1 Reference TS10Xv2-PRI

    Range
    9841707..9895476 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026669871.1 → XP_026525656.1  junction plakoglobin isoform X2

    UniProtKB/TrEMBL
    A0A6J1U4F2

  2. XM_026669870.1 → XP_026525655.1  junction plakoglobin isoform X1

    UniProtKB/TrEMBL
    A0A6J1UCX2
    Related
    ENSNSUP00000017367.1, ENSNSUT00000018484.1

  3. XM_026669869.1 → XP_026525654.1  junction plakoglobin isoform X1

    UniProtKB/TrEMBL
    A0A6J1UCX2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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