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COL3A1 collagen type III alpha 1 chain [ Notechis scutatus (mainland tiger snake) ]

Gene ID: 113412414, updated on 15-Mar-2024

Summary

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Gene symbol
COL3A1
Gene description
collagen type III alpha 1 chain
Gene type
protein coding
RefSeq status
MODEL
Organism
Notechis scutatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Notechis
Orthologs
human mouse all
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Genomic context

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See COL3A1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
51
Annotation release Status Assembly Chr Location
100 current TS10Xv2-PRI (GCF_900518725.1) Unplaced Scaffold NW_020716632.1 (6780774..6857987, complement)

NW_020716632.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113412340 Neighboring gene collagen type V alpha 2 chain Neighboring gene GULP PTB domain containing engulfment adaptor 1 Neighboring gene tissue factor pathway inhibitor

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020716632 Unplaced Scaffold Reference TS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix structural constituent IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
collagen alpha-1(III) chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notechis scutatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TS10Xv2-PRI

Genomic

  1. NW_020716632.1 Reference TS10Xv2-PRI

    Range
    6780774..6857987 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026668018.1 → XP_026523803.1  collagen alpha-1(III) chain

    UniProtKB/TrEMBL
    A0A6J1U5C1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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