U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

COL3A1 collagen type III alpha 1 chain [ Notechis scutatus (mainland tiger snake) ]

Gene ID: 113412414, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
COL3A1
Gene description
collagen type III alpha 1 chain
Gene type
protein coding
RefSeq status
MODEL
Organism
Notechis scutatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Notechis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See COL3A1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
51
Annotation release Status Assembly Chr Location
100 current TS10Xv2-PRI (GCF_900518725.1) Unplaced Scaffold NW_020716632.1 (6780774..6857987, complement)

NW_020716632.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113412340 Neighboring gene collagen type V alpha 2 chain Neighboring gene GULP PTB domain containing engulfment adaptor 1 Neighboring gene tissue factor pathway inhibitor

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_020716632 Unplaced Scaffold Reference TS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix structural constituent IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
collagen alpha-1(III) chain

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Notechis scutatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TS10Xv2-PRI

Genomic

  1. NW_020716632.1 Reference TS10Xv2-PRI

    Range
    6780774..6857987 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026668018.1 → XP_026523803.1  collagen alpha-1(III) chain

    UniProtKB/TrEMBL
    A0A6J1U5C1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.