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OXCT1 3-oxoacid CoA-transferase 1 [ Notechis scutatus (mainland tiger snake) ]

Gene ID: 113411404, updated on 15-Mar-2024

Summary

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Gene symbol
OXCT1
Gene description
3-oxoacid CoA-transferase 1
See related
Ensembl:ENSNSUG00000017062
Gene type
protein coding
RefSeq status
MODEL
Organism
Notechis scutatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Notechis
Orthologs
human mouse all
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Genomic context

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See OXCT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current TS10Xv2-PRI (GCF_900518725.1) Unplaced Scaffold NW_020716626.1 (12090584..12155922, complement)

NW_020716626.1Genomic Context describing neighboring genes Neighboring gene complement component C6-like Neighboring gene complement component C6-like Neighboring gene phosphatidylinositol specific phospholipase C X domain containing 3 Neighboring gene RAB7A interacting MON1-CCZ1 complex subunit 1 Neighboring gene F-box protein 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020716626 Unplaced Scaffold Reference TS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables succinyl-CoA:3-oxo-acid CoA-transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ketone body catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notechis scutatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TS10Xv2-PRI

Genomic

  1. NW_020716626.1 Reference TS10Xv2-PRI

    Range
    12090584..12155922 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026666455.1 → XP_026522240.1  succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial

    UniProtKB/TrEMBL
    A0A6J1TW07
    Related
    ENSNSUP00000023572.1, ENSNSUT00000025067.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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