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THBS1 thrombospondin 1 [ Notechis scutatus (mainland tiger snake) ]

Gene ID: 113410120, updated on 15-Mar-2024

Summary

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Gene symbol
THBS1
Gene description
thrombospondin 1
See related
Ensembl:ENSNSUG00000006349
Gene type
protein coding
RefSeq status
MODEL
Organism
Notechis scutatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Notechis
Orthologs
human mouse all
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Genomic context

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See THBS1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current TS10Xv2-PRI (GCF_900518725.1) Unplaced Scaffold NW_020716619.1 (18516290..18535417)

NW_020716619.1Genomic Context describing neighboring genes Neighboring gene katanin regulatory subunit B1 like 1 Neighboring gene uncharacterized LOC113409952 Neighboring gene fibrous sheath interacting protein 1 Neighboring gene G protein-coupled receptor 176

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020716619 Unplaced Scaffold Reference TS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of angiogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
thrombospondin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Notechis scutatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TS10Xv2-PRI

Genomic

  1. NW_020716619.1 Reference TS10Xv2-PRI

    Range
    18516290..18535417
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026664562.1 → XP_026520347.1  thrombospondin-1

    UniProtKB/TrEMBL
    A0A6J1TP38
    Related
    ENSNSUP00000009791.1, ENSNSUT00000010458.1
Nucleotide Protein
Heading Accession and Version

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