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LOC113386085 putative polypeptide N-acetylgalactosaminyltransferase 9 [ Ctenocephalides felis (cat flea) ]

Gene ID: 113386085, updated on 9-Nov-2023

Summary

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Gene symbol
LOC113386085
Gene description
putative polypeptide N-acetylgalactosaminyltransferase 9
See related
EnsemblRapid:LOC113386085
Gene type
protein coding
RefSeq status
MODEL
Organism
Ctenocephalides felis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Siphonaptera; Pulicidae; Archaeopsyllinae; Ctenocephalides
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Genomic context

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See LOC113386085 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ASM342690v1 (GCF_003426905.1) Unplaced Scaffold NW_020536999.1 (55524967..55534712, complement)

NW_020536999.1Genomic Context describing neighboring genes Neighboring gene DNA-directed RNA polymerases I, II, and III subunit Rpb10 Neighboring gene putative polypeptide N-acetylgalactosaminyltransferase 9 Neighboring gene insulin-like growth factor 2 mRNA-binding protein 2 Neighboring gene insulin-like growth factor 2 mRNA-binding protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020536999 Unplaced Scaffold Reference ASM342690v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenomics resolves the timing and pattern of insect evolution. Misof B, et al. Science, 2014 Nov 7. PMID 25378627
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative polypeptide N-acetylgalactosaminyltransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ctenocephalides felis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM342690v1

Genomic

  1. NW_020536999.1 Reference ASM342690v1

    Range
    55524967..55534712 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026623894.1 → XP_026479679.1  putative polypeptide N-acetylgalactosaminyltransferase 9

    Related
    XP_026479679.1, XM_026623894.1
    Conserved Domains (2) summary
    cd02510
    Location:63 → 361
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:372 → 491
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases