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Csgalnact Chondroitin sulfate N-acetylgalactosaminyltransferase [ Ctenocephalides felis (cat flea) ]

Gene ID: 113384842, updated on 22-May-2024

Summary

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Gene symbol
Csgalnact
Gene description
Chondroitin sulfate N-acetylgalactosaminyltransferase
See related
EnsemblRapid:LOC113384842
Gene type
protein coding
RefSeq status
MODEL
Organism
Ctenocephalides felis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Siphonaptera; Pulicidae; Archaeopsyllinae; Ctenocephalides
Annotation information
Annotation category: partial on reference assembly
Orthologs
fruit fly all
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Genomic context

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See Csgalnact in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM342690v1 (GCF_003426905.1) Unplaced Scaffold NW_020539725.1 (65019386..65165630, complement)

NW_020539725.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113386502 Neighboring gene uncharacterized LOC113386504 Neighboring gene uncharacterized LOC113386505 Neighboring gene A disintegrin and metalloproteinase with thrombospondin motifs 3-like Neighboring gene A disintegrin and metalloproteinase with thrombospondin motifs 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020539725 Unplaced Scaffold Reference ASM342690v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenomics resolves the timing and pattern of insect evolution. Misof B, et al. Science, 2014 Nov 7. PMID 25378627

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate N-acetylgalactosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ctenocephalides felis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM342690v1

Genomic

  1. NW_020539725.1 Reference ASM342690v1

    Range
    65019386..65165630 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026622611.1 → XP_026478396.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

    Related
    XP_026478396.1, XM_026622611.1
    Conserved Domains (1) summary
    cl11394
    Location:99 → 600
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases