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LOC113376605 fringe glycosyltransferase-like [ Ctenocephalides felis (cat flea) ]

Gene ID: 113376605, updated on 9-Nov-2023

Summary

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Gene symbol
LOC113376605
Gene description
fringe glycosyltransferase-like
See related
EnsemblRapid:LOC113376605
Gene type
protein coding
RefSeq status
MODEL
Organism
Ctenocephalides felis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Siphonaptera; Pulicidae; Archaeopsyllinae; Ctenocephalides
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Genomic context

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See LOC113376605 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ASM342690v1 (GCF_003426905.1) Unplaced Scaffold NW_020538040.1 (78604629..78642602, complement)

NW_020538040.1Genomic Context describing neighboring genes Neighboring gene putative aminopeptidase W07G4.4 Neighboring gene DUF1676 domain-containing protein Osi2 Neighboring gene fringe glycosyltransferase-like Neighboring gene putative aminopeptidase W07G4.4 Neighboring gene collagen alpha-5(IV) chain-like Neighboring gene collagen alpha-1(I) chain-like Neighboring gene lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020538040 Unplaced Scaffold Reference ASM342690v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenomics resolves the timing and pattern of insect evolution. Misof B, et al. Science, 2014 Nov 7. PMID 25378627
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fringe glycosyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ctenocephalides felis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM342690v1

Genomic

  1. NW_020538040.1 Reference ASM342690v1

    Range
    78604629..78642602 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026616585.1 → XP_026472370.1  fringe glycosyltransferase-like

    Related
    XP_026472370.1, XM_026616585.1
    Conserved Domains (1) summary
    pfam02434
    Location:98 → 343
    Fringe; Fringe-like

RNA

  1. XR_003367046.1 RNA Sequence

    Related
    XR_003367046.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases