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rt Protein O-mannosyltransferase rt [ Ctenocephalides felis (cat flea) ]

Gene ID: 113373733, updated on 22-May-2024

Summary

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Gene symbol
rt
Gene description
Protein O-mannosyltransferase rt
See related
EnsemblRapid:LOC113373733
Gene type
protein coding
RefSeq status
MODEL
Organism
Ctenocephalides felis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Siphonaptera; Pulicidae; Archaeopsyllinae; Ctenocephalides
Orthologs
fruit fly all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM342690v1 (GCF_003426905.1) Unplaced Scaffold NW_020537758.1 (39753882..39762152)

NW_020537758.1Genomic Context describing neighboring genes Neighboring gene ral guanine nucleotide dissociation stimulator-like 1 Neighboring gene proteasome subunit beta type-7-like Neighboring gene ADP-ribosylation factor GTPase-activating protein 1-like Neighboring gene uncharacterized LOC113373734

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020537758 Unplaced Scaffold Reference ASM342690v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenomics resolves the timing and pattern of insect evolution. Misof B, et al. Science, 2014 Nov 7. PMID 25378627
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate-mannose-protein mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ctenocephalides felis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM342690v1

Genomic

  1. NW_020537758.1 Reference ASM342690v1

    Range
    39753882..39762152
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026614008.1 → XP_026469793.1  protein O-mannosyltransferase 1

    Related
    XP_026469793.1, XM_026614008.1
    Conserved Domains (1) summary
    COG1928
    Location:43 → 742
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases