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LOC113370324 heparan-sulfate 6-O-sulfotransferase 1-like [ Ctenocephalides felis (cat flea) ]

Gene ID: 113370324, updated on 9-Nov-2023

Summary

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Gene symbol
LOC113370324
Gene description
heparan-sulfate 6-O-sulfotransferase 1-like
See related
EnsemblRapid:LOC113370324
Gene type
protein coding
RefSeq status
MODEL
Organism
Ctenocephalides felis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Siphonaptera; Pulicidae; Archaeopsyllinae; Ctenocephalides
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Genomic context

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See LOC113370324 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current ASM342690v1 (GCF_003426905.1) Unplaced Scaffold NW_020537646.1 (5218144..5224533)

NW_020537646.1Genomic Context describing neighboring genes Neighboring gene caspase Dronc-like Neighboring gene uncharacterized LOC113370323 Neighboring gene caspase Dronc-like Neighboring gene zinc finger protein DZIP1L-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020537646 Unplaced Scaffold Reference ASM342690v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan-sulfate 6-O-sulfotransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ctenocephalides felis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM342690v1

Genomic

  1. NW_020537646.1 Reference ASM342690v1

    Range
    5218144..5224533
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026610994.1 → XP_026466779.1  heparan-sulfate 6-O-sulfotransferase 1-like

    Related
    XP_026466779.1, XM_026610994.1
    Conserved Domains (1) summary
    pfam03567
    Location:29 → 258
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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