U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC113367478 xylosyltransferase oxt [ Ctenocephalides felis (cat flea) ]

Gene ID: 113367478, updated on 10-May-2024

Summary

Go to the top of the page Help
Gene symbol
LOC113367478
Gene description
xylosyltransferase oxt
See related
EnsemblRapid:LOC113367478
Gene type
protein coding
RefSeq status
MODEL
Organism
Ctenocephalides felis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Siphonaptera; Pulicidae; Archaeopsyllinae; Ctenocephalides
Orthologs
fruit fly all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC113367478 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM342690v1 (GCF_003426905.1) Unplaced Scaffold NW_020537324.1 (61358487..61361670, complement)

NW_020537324.1Genomic Context describing neighboring genes Neighboring gene SH2/SH3 adaptor protein dock Neighboring gene vacuolar protein sorting 8 Neighboring gene arginine methyltransferase 3 Neighboring gene peptidoglycan-recognition protein 1-like Neighboring gene equilibrative nucleoside transporter 4-like Neighboring gene transfer RNA arginine (anticodon UCU)

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_020537324 Unplaced Scaffold Reference ASM342690v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Phylogenomics resolves the timing and pattern of insect evolution. Misof B, et al. Science, 2014 Nov 7. PMID 25378627
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heparan sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
xylosyltransferase oxt

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Ctenocephalides felis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM342690v1

Genomic

  1. NW_020537324.1 Reference ASM342690v1

    Range
    61358487..61361670 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026609084.1 → XP_026464869.1  xylosyltransferase oxt

    Related
    XP_026464869.1, XM_026609084.1
    Conserved Domains (3) summary
    pfam01822
    Location:165 → 245
    WSC; WSC domain
    pfam12529
    Location:563 → 734
    Xylo_C; Xylosyltransferase C terminal
    cl27418
    Location:278 → 529
    Branch; Core-2/I-Branching enzyme
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases